Muaaz Gul Awan

Muaaz Gul Awan

Computer Systems Engineer 4

National Energy Research Scientific Computing Center (NERSC)

Science Engagement & Workflows Dept.

Application Performance Group

Muaaz Awan is an application performance specialist at NERSC. His expertise includes bioinformatics software development, GPU porting, optimization and performance analysis. Currently, he is associated with the ExaBiome project, contributing as a GPU application developer in the metagenomics analysis software pipelines. Previously, he has worked as a postdoc scholar at NERSC, Lawrence Berkeley National Laboratory (Berkeley Lab), and as a GPU application developer at EMSL, Pacific Northwest National Lab (PNNL). He received his PhD in Computer Science from Western Michigan University under the supervision of Prof. Fahad Saeed in 2019. His doctoral thesis explored high performance computing strategies for LC-MS/MS-based proteomics workflows.

Education

PhD - Western Michigan University, United States

B.Sc. - University of Engineering and Technology Lahore, Pakistan

Recent Publications

Evaluating the potential of disaggregated memory systems for HPC applications

Authors: Ding, N; Maris, P; Nam, HA; Groves, T; Awan, MG; Lindsey, L

August 2024, Concurrency Computation Practice and Experience


Evolving to Find Optimizations Humans Miss: Using Evolutionary Computation to Improve GPU Code for Bioinformatics Applications

Authors: Liou, J-Y; Awan, M; Leyba, K; Šulc, P; Hofmeyr, S; Wu, C-J

December 2024, ACM Transactions on Evolutionary Learning and Optimization


Optimizing MILC-Dslash Performance on NVIDIA A100 GPU: Parallel Strategies using SYCL

Authors: Dufek, AS; Gottlieb, SA; Awan, MG; Augusto, DA; Deslippe, J; Cook, B

November 2024


Performance Modeling and Analysis of a de Bruijn Graph Based Local Assembly Kernel on Multiple Vendor GPUs

Authors: Lindsey, LM; Ding, N; Deslippe, J; Awan, M

November 2024


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