Software and Tools
The table below shows the software installed on Edison that is managed by modules.
| Package | Category | Version | Module | Install Date | Date Made Default |
|---|---|---|---|---|---|
| ABINIT | applications/ material sciences | 7.0.5 | abinit/7.0.5 | 2013-03-12 | 2013-03-12 |
| ADIOS | applications/ I/O | 1.4.1 | adios/1.4.1 | 2013-01-22 | 2013-01-22 |
| ADIOS plain | libraries/ I/O | 1.4.1 | adiosplain/1.4.1 | 2013-01-22 | 2013-01-22 |
| ALTD | applications/ programming | 1.0 | altd/1.0 | 2012-11-21 | 2012-11-21 |
| Amber | applications/ chemistry | 12 | amber/12 | 2013-03-22 | 2013-03-22 |
| AsciiDoc Text based document generation | other/ general | 8.6.8 | asciidoc/8.6.8 | 2013-01-02 | |
| ASE | applications/ material sciences | 3.6.0.2515 | ase/3.6.0.2515 | 2013-01-24 | 2013-01-24 |
| atp | applications/ debugging | 1.6.0 | atp/1.6.0 | 2012-11-08 | 2012-12-05 |
| BerkeleyGW | applications/ material sciences | 1.0.4 | berkeleygw/1.0.4 | 2013-01-22 | 2013-01-22 |
| Boost | libraries/ programming | 1.53 | boost/1.53 | 2013-03-18 | 2013-03-18 |
| bowtie2 | applications/ bioinformatics | 0.12.9 | bowtie/0.12.9 | 2013-02-19 | 2013-02-19 |
| bowtie2 | applications/ bioinformatics | 2.0.6 | bowtie2/2.0.6 | 2013-02-19 | 2013-02-19 |
| bzip2 | applications/ general | 1.0.6 | bzip2/1.0.6 | 2013-01-24 | 2013-01-24 |
| cce | compilers/ general | 8.1.2 | cce/8.1.2 | 2012-11-11 | |
| cce | compilers/ general | 8.1.3 | cce/8.1.3 | 2012-11-29 | 2012-12-07 |
| ccm | other/ services | 2.2.0-1.0500.37245.2.84 | ccm/2.2.0-1.0500.37245.2.84 | 2012-10-17 | 2012-10-17 |
| CDAT | applications/ climate | 5.2 | cdat/5.2 | 2013-01-22 | 2013-01-22 |
| cdo | libraries/ I/O | 1.5.9 | cdo/1.5.9 | 2013-01-21 | |
| CFITSIO | libraries/ I/O | 3.31 | cfitsio/3.31 | 2013-01-04 | 2013-01-04 |
| CMake | other/ programming | 2.8.10.2 | cmake/2.8.10.2 | 2013-01-02 | 2013-01-02 |
| cray-hdf5 | libraries/ I/O | 1.8.9 | cray-hdf5/1.8.9 | 2012-11-09 | 2012-12-05 |
| cray-hdf5-parallel | libraries/ I/O | 1.8.9 | cray-hdf5-parallel/1.8.9 | 2012-11-09 | 2012-12-05 |
| cray-libsci | libraries/ math | 12.0.00 | cray-libsci/12.0.00 | 2012-11-09 | 2012-12-05 |
| cray-mpich2 | libraries/ programming | 5.6.0 | cray-mpich2/5.6.0 | 2012-12-05 | 2012-12-05 |
| cray-netcdf | libraries/ I/O | 4.2.1.1 | cray-netcdf/4.2.1.1 | 2012-11-12 | 2012-12-05 |
| cray-netcdf-hdf5parallel | libraries/ I/O | 4.2.1.1 | cray-netcdf-hdf5parallel/4.2.1.1 | 2012-11-12 | 2012-12-05 |
| cray-petsc | libraries/ math | 3.3.03 | cray-petsc/3.3.03 | 2012-11-09 | 2012-12-05 |
| cray-petsc-complex | libraries/ math | 3.3.03 | cray-petsc-complex/3.3.03 | 2012-11-09 | 2012-12-05 |
| cray-shmem | libraries/ programming | 5.6.0 | cray-shmem/5.6.0 | 2012-12-05 | 2012-12-05 |
| cray-tpsl | libraries/ math | 1.3.01 | cray-tpsl/1.3.01 | 2012-11-09 | 2012-12-05 |
| cray-trilinos | libraries/ math | 10.12.1.1 | cray-trilinos/10.12.1.1 | 2012-11-09 | |
| craype | other/ genreal | 1.00 | craype/1.00 | 2012-11-07 | 2012-12-05 |
| ctss | applications/ I/O | 1.0 | ctss/1.0 | 2013-01-04 | 2013-01-04 |
| cURL | applications/ network | 7.28.1 | curl/7.28.1 | 2013-01-07 | 2013-01-07 |
| Cython | applications/ programming | 0.16 | cython/0.16 | 2013-01-17 | 2013-01-17 |
| Cython | applications/ programming | 0.17.4 | cython/0.17.4 | 2013-01-24 | 2013-01-24 |
| Darshan | applications/ debugging | 2.2.4 | darshan/2.2.4 | 2013-01-22 | 2013-01-22 |
| Darshan | applications/ debugging | 2.2.4-old | darshan/2.2.4-old | 2013-01-31 | |
| Darshan | applications/ debugging | 2.2.5-pre1 | darshan/2.2.5-pre1 | 2013-02-04 | 2013-02-04 |
| Darshan | applications/ debugging | 2.2.5-pre3 | darshan/2.2.5-pre3 | 2013-02-23 | 2013-02-23 |
| DDT | applications/ debugging | 3.2.1 | ddt/3.2.1 | 2013-01-16 | 2013-01-19 |
| dfftpack | libraries/ math | 1.0 | dfftpack/1.0 | 2013-01-07 | 2013-01-07 |
| emacs | applications/ general | 24.2 | emacs/24.2 | 2013-01-07 | 2013-01-07 |
| eswrap | other/ services | 1.0.19-1.010001.264.0 | eswrap/1.0.19-1.010001.264.0 | 2012-11-13 | 2012-11-13 |
| fftw | libraries/ math | 2.1.5.4 | fftw/2.1.5.4 | 2012-09-10 | |
| fftw | libraries/ math | 3.3.0.1 | fftw/3.3.0.1 | 2012-06-14 | 2012-12-05 |
| FFTW3 | libraries/ programming | 3.3.3 | fftw-ccm/3.3.3 | 2013-02-16 | 2013-02-16 |
| G09 | applications/ chemistry | c1 | g09/c1 | 2013-02-08 | 2013-02-08 |
| GAMESS | applications/ chemistry | 1May2012R2 | gamess/1May2012R2 | 2013-03-06 | |
| gcc | compilers/ general | 4.4.4 | gcc/4.4.4 | 2011-04-27 | |
| gcc | compilers/ general | 4.7.2 | gcc/4.7.2 | 2012-11-08 | 2012-12-05 |
| Git | applications/ programming | 1.8.1.1 | git/1.8.1.1 | 2013-01-22 | 2013-01-22 |
| GNU Scientific Library (GSL) | libraries/ math | 1.15 | gsl/1.15 | 2013-01-02 | 2013-01-02 |
| gnuplot | applications/ visualization | 4.6.2 | gnuplot/4.6.2 | 2013-03-21 | 2013-03-21 |
| gv | applications/ visualization | 3.7.3 | gv/3.7.3 | 2013-02-26 | |
| h4h5tools | libraries/ I/O | 2.2.1 | h4h5tools/2.2.1 | 2013-02-26 | |
| h5py | applications/ programming | 2.0.1 | h5py/2.0.1 | 2013-01-25 | 2013-01-25 |
| HDF | libraries/ I/O | 4.2.8 | hdf/4.2.8 | 2013-01-24 | 2013-01-24 |
| intel | compilers/ general | 13.0.1.117 | intel/13.0.1.117 | 2012-11-08 | 2012-12-20 |
| iobuf | libraries/ I/O | 2.0.2 | iobuf/2.0.2 | 2011-05-11 | 2012-12-05 |
| IPM | libraries/ performance | 2.00 | ipm/2.00 | 2013-02-06 | 2013-02-06 |
| Ipython | applications/ programming | 0.13.1 | ipython/0.13.1 | 2013-01-17 | 2013-01-17 |
| java | compilers/ general | jdk1.7.0_07 | java/jdk1.7.0_07 | 2012-09-13 | 2012-12-05 |
| JPEG | other/ general | 8d | jpeg/8d | 2013-01-08 | 2013-01-20 |
| LAMMPS | applications/ material sciences | 20130106 | lammps/20130106 | 2013-01-07 | 2013-01-07 |
| LaTeX | applications/ general | 2012 | latex/2012 | 2013-02-26 | 2013-02-26 |
| matplotlib | applications/ programming | 1.1.0 | matplotlib/1.1.0 | 2013-01-17 | 2013-01-17 |
| Mercurial | applications/ programming | 1.6.2 | phonopy/1.6.2 | 2013-01-24 | 2013-01-24 |
| Mercurial | applications/ programming | 2.2.1 | mercurial/2.2.1 | 2013-01-20 | 2013-01-20 |
| Mercurial | applications/ programming | 2.4.2 | mercurial/2.4.2 | 2013-01-24 | 2013-01-24 |
| MKL | libraries/ math | 13.0.1 | mkl/13.0.1 | 2013-02-11 | 2013-02-11 |
| MKL fftw2 interface libraries | libraries/ programming | 13.0.1.117 | mkl-fftw2/13.0.1.117 | 2013-04-02 | 2013-04-02 |
| modules | other/ services | 3.2.6.6 | modules/3.2.6.6 | 2012-12-03 | |
| molpro | applications/ chemistry | 2010.1.26 | molpro/2010.1.26 | 2013-02-07 | |
| mpi4py | applications/ programming | 1.3 | mpi4py/1.3 | 2013-01-20 | 2013-01-20 |
| MySQL | other/ general | 5.1.63 | mysql/5.1.63 | 2012-11-21 | 2012-11-21 |
| MySQL-python | applications/ programming | 1.2.3 | mysqlpython/1.2.3 | 2013-01-20 | 2013-01-20 |
| NAMD | applications/ chemistry | cvs_01032013 | namd/cvs_01032013 | 2013-01-07 | 2013-01-07 |
| nano | other/ general | 2.2.6 | nano/2.2.6 | 2013-01-22 | 2013-01-22 |
| NCAR | libraries/ visualization | 6.1.1 | ncar/6.1.1 | 2013-02-06 | 2013-02-06 |
| NCAR | libraries/ visualization | 6.1.1 | ncl/6.1.1 | 2013-02-06 | 2013-02-06 |
| nco | libraries/ I/O | 4.2.5 | nco/4.2.5 | 2013-02-05 | 2013-02-05 |
| ncview | applications/ visualization | 2.1.2 | ncview/2.1.2 | 2013-01-21 | 2013-01-21 |
| netcdf4-python | applications/ programming | 1.0.2 | netcdf4-python/1.0.2 | 2013-02-21 | 2013-02-21 |
| ntk | libraries/ programming | 1.5.0 | ntk/1.5.0 | 2012-01-09 | |
| numexpr | applications/ programming | 2.0.1 | numexpr/2.0.1 | 2013-01-17 | 2013-01-17 |
| Numpy | applications/ programming | 1.6.2 | numpy/1.6.2 | 2013-01-17 | 2013-01-17 |
| NWChem | applications/ chemistry | 6.1.1 | nwchem/6.1.1 | 2013-03-22 | 2013-03-22 |
| onesided | libraries/ programming | 1.5.0 | onesided/1.5.0 | 2012-01-09 | |
| Open MPI | libraries/ programming | 1.6.3 | openmpi-ccm/1.6.3 | 2013-02-04 | 2013-02-15 |
| papi | libraries/ performance | 5.0.1 | papi/5.0.1 | 2012-09-24 | 2012-12-05 |
| parallel-netcdf | libraries/ I/O | 1.3.1 | parallel-netcdf/1.3.1 | 2012-10-10 | 2012-12-05 |
| perftools | applications/ performance | 6.0.1 | perftools/6.0.1 | 2012-10-23 | 2012-12-05 |
| PIL | applications/ programming | 1.1.7 | pil/1.1.7 | 2013-01-17 | 2013-01-17 |
| PrgEnv-cray | other/ general | 5.0.15 | PrgEnv-cray/5.0.15 | 2012-10-26 | 2012-12-03 |
| PrgEnv-gnu | other/ general | 5.0.15 | PrgEnv-gnu/5.0.15 | 2012-10-26 | 2012-12-03 |
| PrgEnv-intel | other/ general | 5.0.15 | PrgEnv-intel/5.0.15 | 2012-10-26 | 2012-12-03 |
| pspline | libraries/ math | nersc1.0 | pspline/nersc1.0 | 2013-02-05 | |
| pycdf | applications/ programming | 0.6-3b | pycdf/0.6-3b | 2013-01-24 | |
| PyHDF | applications/ programming | 0.8.3 | pyhdf/0.8.3 | 2013-01-25 | 2013-01-25 |
| pysqlite | applications/ programming | 2.6.3 | pysqlite/2.6.3 | 2013-01-29 | 2013-01-29 |
| PyTables | applications/ programming | 2.3.1 | pytables/2.3.1 | 2013-01-25 | 2013-01-25 |
| Python | applications/ programming | 2.7.3 | python/2.7.3 | 2013-01-17 | 2013-01-17 |
| Python | applications/ programming | 2.7.3 | python_base/2.7.3 | 2013-01-17 | 2013-01-17 |
| Quantum ESPRESSO | applications/ material sciences | 5.0.0 | espresso/5.0.0 | 2013-04-02 | |
| Quantum ESPRESSO | applications/ material sciences | 5.0.2 | espresso/5.0.2 | 2013-01-22 | 2013-01-22 |
| Quantum ESPRESSO | applications/ material sciences | 5.0.2-2 | espresso/5.0.2-2 | 2013-03-15 | |
| samtools | applications/ bioinformatics | 0.1.18 | samtools/0.1.18 | 2013-02-19 | 2013-02-19 |
| SciPy | applications/ programming | 0.11.0 | scipy/0.11.0 | 2013-01-17 | 2013-01-17 |
| sprng | libraries/ math | 2.0 | sprng/2.0 | 2013-02-06 | |
| stat | libraries/ debugging | 1.2.1.3 | stat/1.2.1.3 | 2012-12-05 | |
| szip | libraries/ I/O | 2.1 | szip/2.1 | 2013-01-23 | 2013-01-23 |
| taskfarmer | other/ general | 1.6.0 | taskfarmer/1.6.0 | 2013-01-23 | 2013-01-23 |
| Tcl | libraries/ programming | 8.5.13 | tcl/8.5.13 | 2013-01-07 | 2013-01-07 |
| tophat | applications/ bioinformatics | 2.0.7 | tophat/2.0.7 | 2013-02-19 | 2013-02-19 |
| TotalView | applications/ debugging | 8.11.0 | totalview/8.11.0 | 2013-01-19 | 2013-01-19 |
| totalview-support | applications/ debugging | 1.1.4 | totalview-support/1.1.4 | 2013-01-19 | 2013-01-19 |
| Training | other/ general | 2013 | training/2013 | 2013-02-11 | 2013-02-11 |
| udunits | libraries/ math | 2.1.24 | udunits/2.1.24 | 2013-01-23 | 2013-01-23 |
| USG Default Modules | os/ general | 1.0 | usg-default-modules/1.0 | 2012-11-21 | 2012-11-21 |
| USG Environment | other/ general | 1.1 | usg/1.1 | 2012-11-21 | 2012-11-21 |
| VASP | applications/ material sciences | 5.3.2 | vasp/5.3.2 | 2013-01-04 | 2013-02-05 |
| VASP | applications/ material sciences | 5.3.2_vtst | vasp/5.3.2_vtst | 2013-01-04 | |
| VASP | applications/ material sciences | 5.3.3 | vasp/5.3.3 | 2013-01-04 | |
| virtualenv | applications/ programming | 1.8.2 | virtualenv/1.8.2 | 2013-01-17 | 2013-01-17 |
| virtualenv | applications/ programming | 3.6 | virtualenvwrapper/3.6 | 2013-02-15 | 2013-02-15 |
| VisIt | applications/ visualization | 2.6.1 | visit/2.6.1 | 2013-01-25 | 2013-01-25 |
| VisIt | applications/ visualization | 2.6.2 | visit/2.6.2 | 2013-03-22 | 2013-03-22 |
| WIEN2k | applications/ material sciences | 12.1 | wien2k-ccm/12.1 | 2013-02-19 | 2013-02-19 |
| xc-sysroot | os/ services | 5.0.15 | xc-sysroot/5.0.15 | 2012-10-18 | |
| xt-mpich2 | libraries/ programming | 5.6.0 | xt-mpich2/5.6.0 | 2012-12-05 | 2012-12-05 |
| xt-shmem | libraries/ programming | 5.6.0 | xt-shmem/5.6.0 | 2012-12-05 | 2012-12-05 |
| zlib | libraries/ I/O | 1.2.7 | zlib/1.2.7 | 2013-01-17 | 2013-01-17 |
